ALSE - Motif Finding Tool
The University of Hong Kong
Department of Computer Science, The University of Hong Kong
Useful Links

What's new

* New Voting Algorithm for Discovering Long Motifs [paper (pdf)]

ALSE - Download Here
version 1.07 (06 May 2005)

Please send queries or comments to alse(AT)cs(DOT)hku(DOT)hk.



What's ALSE?


ALSE is a software package that discovers the common patterns in a set of DNA sequences.

ALSE finds common patterns of the binding sites for an unknown transcription factor from two sets of sequences, one known to contain binding sites while the other supposed to contain none. Our package can perform exceptionally well when both sets of sequences are available, and comparatively well when only the former set is available. [more]


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